AME (Analysis of Motif Enrichment): Compiled on Mar 2 2012 at 16:08:25 ------------------------------ Copyright (c) Robert McLeay & Timothy Bailey , 2009. Command line ame --oc results/mea_results_ame/Nanog.ame_out --verbose 1 --fix-partition 10343 --bgformat 0 data/chipseq_databases/Chen_ChIP_seq_datasets//mm8_Nanog_ESC_chen-shuffled_w_bg.fasta data/motif_databases/all_vertebrates.meme Not in partition maximisation mode. Fixing partition at 10343. Threshold p-value for reporting results: 0.001 Motif p-values are corrected by #Motifs * #ThresholdsTested - (532 * 1 = 532) 1. Fisher-exact p-value of motif MA0142.1 Pou5f1 top 10343 seqs: 3.231e-281 (Corrected p-value: 1.719e-278) 2. Fisher-exact p-value of motif MA0143.1 Sox2 top 10343 seqs: 1.504e-254 (Corrected p-value: 8.003e-252) 3. Fisher-exact p-value of motif UP00030_1 Sox11_primary top 10343 seqs: 5.92e-214 (Corrected p-value: 3.149e-211) 4. Fisher-exact p-value of motif UP00062_1 Sox4_primary top 10343 seqs: 2.536e-205 (Corrected p-value: 1.349e-202) 5. Fisher-exact p-value of motif MA0039.2 Klf4 top 10343 seqs: 4.114e-181 (Corrected p-value: 2.189e-178) 6. Fisher-exact p-value of motif UP00093_1 Klf7_primary top 10343 seqs: 2.054e-167 (Corrected p-value: 1.093e-164) 7. Fisher-exact p-value of motif UP00191_1 Pou2f2_3748.1 top 10343 seqs: 2.654e-151 (Corrected p-value: 1.412e-148) 8. Fisher-exact p-value of motif UP00179_1 Pou2f3_3986.2 top 10343 seqs: 3.055e-151 (Corrected p-value: 1.625e-148) 9. Fisher-exact p-value of motif MA0079.2 SP1 top 10343 seqs: 9.325e-122 (Corrected p-value: 4.961e-119) 10. Fisher-exact p-value of motif UP00034_1 Sox7_primary top 10343 seqs: 1.775e-110 (Corrected p-value: 9.445e-108) 11. Fisher-exact p-value of motif UP00099_2 Ascl2_secondary top 10343 seqs: 2.732e-110 (Corrected p-value: 1.453e-107) 12. Fisher-exact p-value of motif UP00102_2 Zic1_secondary top 10343 seqs: 7.489e-110 (Corrected p-value: 3.984e-107) 13. Fisher-exact p-value of motif MA0149.1 EWSR1-FLI1 top 10343 seqs: 8.525e-110 (Corrected p-value: 4.535e-107) 14. Fisher-exact p-value of motif UP00057_2 Zic2_secondary top 10343 seqs: 9.842e-107 (Corrected p-value: 5.236e-104) 15. Fisher-exact p-value of motif UP00006_2 Zic3_secondary top 10343 seqs: 4.19e-105 (Corrected p-value: 2.229e-102) 16. Fisher-exact p-value of motif UP00021_1 Zfp281_primary top 10343 seqs: 2.122e-104 (Corrected p-value: 1.129e-101) 17. Fisher-exact p-value of motif UP00002_1 Sp4_primary top 10343 seqs: 1.679e-101 (Corrected p-value: 8.93e-99) 18. Fisher-exact p-value of motif MA0073.1 RREB1 top 10343 seqs: 3.638e-94 (Corrected p-value: 1.935e-91) 19. Fisher-exact p-value of motif UP00033_2 Zfp410_secondary top 10343 seqs: 4.302e-91 (Corrected p-value: 2.289e-88) 20. Fisher-exact p-value of motif UP00101_2 Sox12_secondary top 10343 seqs: 1.35e-87 (Corrected p-value: 7.18e-85) 21. Fisher-exact p-value of motif UP00061_1 Foxl1_primary top 10343 seqs: 1.201e-82 (Corrected p-value: 6.387e-80) 22. Fisher-exact p-value of motif MA0077.1 SOX9 top 10343 seqs: 2.242e-79 (Corrected p-value: 1.193e-76) 23. Fisher-exact p-value of motif MA0162.1 Egr1 top 10343 seqs: 3.23e-74 (Corrected p-value: 1.718e-71) 24. Fisher-exact p-value of motif UP00101_1 Sox12_primary top 10343 seqs: 9.971e-73 (Corrected p-value: 5.305e-70) 25. Fisher-exact p-value of motif UP00023_1 Sox30_primary top 10343 seqs: 2.378e-71 (Corrected p-value: 1.265e-68) 26. Fisher-exact p-value of motif UP00043_2 Bcl6b_secondary top 10343 seqs: 1.024e-70 (Corrected p-value: 5.45e-68) 27. Fisher-exact p-value of motif UP00000_2 Smad3_secondary top 10343 seqs: 4.761e-68 (Corrected p-value: 2.533e-65) 28. Fisher-exact p-value of motif UP00408_2 Gabpa_secondary top 10343 seqs: 4.698e-67 (Corrected p-value: 2.499e-64) 29. Fisher-exact p-value of motif MA0079.1 SP1 top 10343 seqs: 3.24e-64 (Corrected p-value: 1.724e-61) 30. Fisher-exact p-value of motif UP00021_2 Zfp281_secondary top 10343 seqs: 6.294e-63 (Corrected p-value: 3.349e-60) 31. Fisher-exact p-value of motif MA0084.1 SRY top 10343 seqs: 2.871e-62 (Corrected p-value: 1.527e-59) 32. Fisher-exact p-value of motif UP00025_1 Foxk1_primary top 10343 seqs: 3.663e-59 (Corrected p-value: 1.949e-56) 33. Fisher-exact p-value of motif MA0062.2 GABPA top 10343 seqs: 1.011e-58 (Corrected p-value: 5.381e-56) 34. Fisher-exact p-value of motif UP00073_2 Foxa2_secondary top 10343 seqs: 2.438e-57 (Corrected p-value: 1.297e-54) 35. Fisher-exact p-value of motif UP00073_1 Foxa2_primary top 10343 seqs: 1.889e-56 (Corrected p-value: 1.005e-53) 36. Fisher-exact p-value of motif MA0148.1 FOXA1 top 10343 seqs: 3.092e-56 (Corrected p-value: 1.645e-53) 37. Fisher-exact p-value of motif UP00039_1 Foxj3_primary top 10343 seqs: 5.436e-56 (Corrected p-value: 2.892e-53) 38. Fisher-exact p-value of motif UP00061_2 Foxl1_secondary top 10343 seqs: 7.641e-56 (Corrected p-value: 4.065e-53) 39. Fisher-exact p-value of motif UP00015_1 Ehf_primary top 10343 seqs: 2.205e-54 (Corrected p-value: 1.173e-51) 40. Fisher-exact p-value of motif UP00004_2 Sox14_secondary top 10343 seqs: 2.893e-54 (Corrected p-value: 1.539e-51) 41. Fisher-exact p-value of motif UP00407_1 Elf3_primary top 10343 seqs: 3.652e-54 (Corrected p-value: 1.943e-51) 42. Fisher-exact p-value of motif MA0156.1 FEV top 10343 seqs: 6.518e-53 (Corrected p-value: 3.467e-50) 43. Fisher-exact p-value of motif UP00037_1 Zfp105_primary top 10343 seqs: 1.95e-51 (Corrected p-value: 1.037e-48) 44. Fisher-exact p-value of motif UP00051_1 Sox8_primary top 10343 seqs: 5.787e-50 (Corrected p-value: 3.079e-47) 45. Fisher-exact p-value of motif UP00097_2 Mtf1_secondary top 10343 seqs: 7.385e-50 (Corrected p-value: 3.929e-47) 46. Fisher-exact p-value of motif UP00016_2 Sry_secondary top 10343 seqs: 4.804e-49 (Corrected p-value: 2.556e-46) 47. Fisher-exact p-value of motif UP00075_1 Sox15_primary top 10343 seqs: 1.168e-48 (Corrected p-value: 6.215e-46) 48. Fisher-exact p-value of motif MA0039.1 Klf4 top 10343 seqs: 4.561e-48 (Corrected p-value: 2.427e-45) 49. Fisher-exact p-value of motif MA0136.1 ELF5 top 10343 seqs: 1.964e-47 (Corrected p-value: 1.045e-44) 50. Fisher-exact p-value of motif UP00041_1 Foxj1_primary top 10343 seqs: 6.182e-47 (Corrected p-value: 3.289e-44) 51. Fisher-exact p-value of motif UP00211_1 Pou3f3_3235.2 top 10343 seqs: 1.555e-46 (Corrected p-value: 8.271e-44) 52. Fisher-exact p-value of motif UP00007_1 Egr1_primary top 10343 seqs: 2.594e-46 (Corrected p-value: 1.38e-43) 53. Fisher-exact p-value of motif UP00077_2 Srf_secondary top 10343 seqs: 1.134e-45 (Corrected p-value: 6.032e-43) 54. Fisher-exact p-value of motif UP00096_2 Sox13_secondary top 10343 seqs: 8.69e-44 (Corrected p-value: 4.623e-41) 55. Fisher-exact p-value of motif UP00029_1 Tbp_primary top 10343 seqs: 1.022e-43 (Corrected p-value: 5.438e-41) 56. Fisher-exact p-value of motif UP00064_1 Sox18_primary top 10343 seqs: 1.993e-43 (Corrected p-value: 1.06e-40) 57. Fisher-exact p-value of motif UP00022_1 Zfp740_primary top 10343 seqs: 3.1e-43 (Corrected p-value: 1.649e-40) 58. Fisher-exact p-value of motif MA0062.1 GABPA top 10343 seqs: 3.198e-42 (Corrected p-value: 1.701e-39) 59. Fisher-exact p-value of motif UP00091_1 Sox5_primary top 10343 seqs: 6.192e-42 (Corrected p-value: 3.294e-39) 60. Fisher-exact p-value of motif MA0041.1 Foxd3 top 10343 seqs: 1.575e-41 (Corrected p-value: 8.381e-39) 61. Fisher-exact p-value of motif UP00047_1 Zbtb7b_primary top 10343 seqs: 5.41e-41 (Corrected p-value: 2.878e-38) 62. Fisher-exact p-value of motif UP00391_1 Hoxa3_primary top 10343 seqs: 6.755e-41 (Corrected p-value: 3.593e-38) 63. Fisher-exact p-value of motif MA0078.1 Sox17 top 10343 seqs: 2.82e-39 (Corrected p-value: 1.5e-36) 64. Fisher-exact p-value of motif MA0042.1 FOXI1 top 10343 seqs: 6.648e-38 (Corrected p-value: 3.537e-35) 65. Fisher-exact p-value of motif UP00214_1 Hoxb5_3122.2 top 10343 seqs: 2.274e-36 (Corrected p-value: 1.21e-33) 66. Fisher-exact p-value of motif UP00254_1 Pou2f1_3081.2 top 10343 seqs: 4.431e-35 (Corrected p-value: 2.357e-32) 67. Fisher-exact p-value of motif UP00408_1 Gabpa_primary top 10343 seqs: 6.229e-34 (Corrected p-value: 3.314e-31) 68. Fisher-exact p-value of motif UP00189_1 Hoxa5_3415.1 top 10343 seqs: 1e-33 (Corrected p-value: 5.321e-31) 69. Fisher-exact p-value of motif MA0047.2 Foxa2 top 10343 seqs: 6.211e-33 (Corrected p-value: 3.304e-30) 70. Fisher-exact p-value of motif MA0080.2 SPI1 top 10343 seqs: 9.958e-32 (Corrected p-value: 5.297e-29) 71. Fisher-exact p-value of motif UP00242_1 Hoxc8_3429.2 top 10343 seqs: 1.428e-30 (Corrected p-value: 7.599e-28) 72. Fisher-exact p-value of motif UP00174_1 Hoxa2_3079.1 top 10343 seqs: 1.49e-30 (Corrected p-value: 7.927e-28) 73. Fisher-exact p-value of motif MA0087.1 Sox5 top 10343 seqs: 3.88e-30 (Corrected p-value: 2.064e-27) 74. Fisher-exact p-value of motif MA0137.1 STAT1 top 10343 seqs: 5.123e-30 (Corrected p-value: 2.725e-27) 75. Fisher-exact p-value of motif UP00255_1 Dbx1_3486.1 top 10343 seqs: 8.482e-30 (Corrected p-value: 4.513e-27) 76. Fisher-exact p-value of motif UP00042_2 Gm397_secondary top 10343 seqs: 1.362e-29 (Corrected p-value: 7.248e-27) 77. Fisher-exact p-value of motif MA0055.1 Myf top 10343 seqs: 3.819e-29 (Corrected p-value: 2.032e-26) 78. Fisher-exact p-value of motif MA0068.1 Pax4 top 10343 seqs: 6.512e-29 (Corrected p-value: 3.465e-26) 79. Fisher-exact p-value of motif UP00169_1 Lmx1b_3433.2 top 10343 seqs: 1.212e-28 (Corrected p-value: 6.449e-26) 80. Fisher-exact p-value of motif UP00391_3 Hoxa3_2783.2 top 10343 seqs: 1.519e-27 (Corrected p-value: 8.083e-25) 81. Fisher-exact p-value of motif UP00188_1 Lmx1a_2238.2 top 10343 seqs: 2.812e-27 (Corrected p-value: 1.496e-24) 82. Fisher-exact p-value of motif MA0157.1 FOXO3 top 10343 seqs: 5.915e-27 (Corrected p-value: 3.147e-24) 83. Fisher-exact p-value of motif MA0004.1 Arnt top 10343 seqs: 6.102e-27 (Corrected p-value: 3.246e-24) 84. Fisher-exact p-value of motif MA0093.1 USF1 top 10343 seqs: 6.102e-27 (Corrected p-value: 3.246e-24) 85. Fisher-exact p-value of motif MA0104.1 Mycn top 10343 seqs: 6.102e-27 (Corrected p-value: 3.246e-24) 86. Fisher-exact p-value of motif UP00036_2 Myf6_secondary top 10343 seqs: 6.484e-27 (Corrected p-value: 3.449e-24) 87. Fisher-exact p-value of motif MA0141.1 Esrrb top 10343 seqs: 1.085e-26 (Corrected p-value: 5.77e-24) 88. Fisher-exact p-value of motif UP00071_1 Sox21_primary top 10343 seqs: 4.063e-26 (Corrected p-value: 2.162e-23) 89. Fisher-exact p-value of motif MA0160.1 NR4A2 top 10343 seqs: 7.135e-26 (Corrected p-value: 3.796e-23) 90. Fisher-exact p-value of motif UP00212_1 Lhx5_2279.1 top 10343 seqs: 9.89e-26 (Corrected p-value: 5.262e-23) 91. Fisher-exact p-value of motif UP00130_1 Lhx3_3431.1 top 10343 seqs: 1.205e-25 (Corrected p-value: 6.41e-23) 92. Fisher-exact p-value of motif UP00202_1 Dlx1_1741.2 top 10343 seqs: 1.898e-25 (Corrected p-value: 1.01e-22) 93. Fisher-exact p-value of motif MA0102.1 Cebpa top 10343 seqs: 3.539e-25 (Corrected p-value: 1.883e-22) 94. Fisher-exact p-value of motif MA0019.1 Ddit3::Cebpa top 10343 seqs: 4.396e-25 (Corrected p-value: 2.339e-22) 95. Fisher-exact p-value of motif UP00182_1 Hoxa6_1040.1 top 10343 seqs: 4.574e-24 (Corrected p-value: 2.433e-21) 96. Fisher-exact p-value of motif UP00079_1 Esrra_primary top 10343 seqs: 6.474e-24 (Corrected p-value: 3.444e-21) 97. Fisher-exact p-value of motif UP00022_2 Zfp740_secondary top 10343 seqs: 6.992e-24 (Corrected p-value: 3.72e-21) 98. Fisher-exact p-value of motif UP00113_1 Hoxc4_3491.1 top 10343 seqs: 1.485e-23 (Corrected p-value: 7.9e-21) 99. Fisher-exact p-value of motif MA0164.1 Nr2e3 top 10343 seqs: 2.227e-23 (Corrected p-value: 1.185e-20) 100. Fisher-exact p-value of motif MA0090.1 TEAD1 top 10343 seqs: 2.434e-23 (Corrected p-value: 1.295e-20) 101. Fisher-exact p-value of motif UP00128_1 Pou3f2_2824.1 top 10343 seqs: 2.623e-23 (Corrected p-value: 1.396e-20) 102. Fisher-exact p-value of motif UP00124_1 Ipf1_3815.1 top 10343 seqs: 2.664e-23 (Corrected p-value: 1.417e-20) 103. Fisher-exact p-value of motif UP00037_2 Zfp105_secondary top 10343 seqs: 7.913e-23 (Corrected p-value: 4.21e-20) 104. Fisher-exact p-value of motif UP00127_1 Gsh2_3990.2 top 10343 seqs: 1.189e-22 (Corrected p-value: 6.326e-20) 105. Fisher-exact p-value of motif UP00099_1 Ascl2_primary top 10343 seqs: 1.502e-22 (Corrected p-value: 7.99e-20) 106. Fisher-exact p-value of motif MA0030.1 FOXF2 top 10343 seqs: 3.62e-22 (Corrected p-value: 1.926e-19) 107. Fisher-exact p-value of motif MA0144.1 Stat3 top 10343 seqs: 4.57e-22 (Corrected p-value: 2.431e-19) 108. Fisher-exact p-value of motif UP00244_1 Tlx2_3498.2 top 10343 seqs: 5.173e-22 (Corrected p-value: 2.752e-19) 109. Fisher-exact p-value of motif UP00260_1 Hoxc6_3954.2 top 10343 seqs: 1.117e-21 (Corrected p-value: 5.944e-19) 110. Fisher-exact p-value of motif MA0102.2 CEBPA top 10343 seqs: 1.332e-21 (Corrected p-value: 7.089e-19) 111. Fisher-exact p-value of motif UP00144_1 Hoxb4_2627.1 top 10343 seqs: 4.634e-21 (Corrected p-value: 2.466e-18) 112. Fisher-exact p-value of motif UP00262_1 Lhx1_2240.2 top 10343 seqs: 4.897e-21 (Corrected p-value: 2.605e-18) 113. Fisher-exact p-value of motif UP00016_1 Sry_primary top 10343 seqs: 6.108e-21 (Corrected p-value: 3.25e-18) 114. Fisher-exact p-value of motif MA0048.1 NHLH1 top 10343 seqs: 6.5e-21 (Corrected p-value: 3.458e-18) 115. Fisher-exact p-value of motif UP00215_1 Vax1_3499.1 top 10343 seqs: 8.327e-21 (Corrected p-value: 4.43e-18) 116. Fisher-exact p-value of motif UP00014_1 Sox17_primary top 10343 seqs: 1.375e-20 (Corrected p-value: 7.317e-18) 117. Fisher-exact p-value of motif UP00264_1 Hoxa1_3425.1 top 10343 seqs: 1.613e-20 (Corrected p-value: 8.583e-18) 118. Fisher-exact p-value of motif UP00252_1 Hoxc5_2630.2 top 10343 seqs: 1.783e-20 (Corrected p-value: 9.488e-18) 119. Fisher-exact p-value of motif UP00105_1 Pou3f4_3773.1 top 10343 seqs: 8.857e-20 (Corrected p-value: 4.712e-17) 120. Fisher-exact p-value of motif UP00154_1 Dlx3_1030.1 top 10343 seqs: 2.106e-19 (Corrected p-value: 1.12e-16) 121. Fisher-exact p-value of motif UP00164_1 Hoxa7_2668.2 top 10343 seqs: 2.716e-19 (Corrected p-value: 1.445e-16) 122. Fisher-exact p-value of motif MA0083.1 SRF top 10343 seqs: 2.978e-19 (Corrected p-value: 1.584e-16) 123. Fisher-exact p-value of motif UP00140_1 Hoxd1_3448.1 top 10343 seqs: 3.388e-19 (Corrected p-value: 1.802e-16) 124. Fisher-exact p-value of motif UP00086_1 Irf3_primary top 10343 seqs: 4.145e-19 (Corrected p-value: 2.205e-16) 125. Fisher-exact p-value of motif UP00168_1 Hoxd8_2644.1 top 10343 seqs: 5.547e-19 (Corrected p-value: 2.951e-16) 126. Fisher-exact p-value of motif UP00110_1 Dlx4_3488.2 top 10343 seqs: 5.7e-19 (Corrected p-value: 3.032e-16) 127. Fisher-exact p-value of motif UP00200_1 Nkx6-1_2825.1 top 10343 seqs: 9.996e-19 (Corrected p-value: 5.318e-16) 128. Fisher-exact p-value of motif UP00196_1 Hoxa4_3426.1 top 10343 seqs: 1.46e-18 (Corrected p-value: 7.768e-16) 129. Fisher-exact p-value of motif UP00004_1 Sox14_primary top 10343 seqs: 1.546e-18 (Corrected p-value: 8.223e-16) 130. Fisher-exact p-value of motif UP00238_1 Nkx6-3_3446.1 top 10343 seqs: 2.614e-18 (Corrected p-value: 1.391e-15) 131. Fisher-exact p-value of motif UP00241_1 Hoxd3_1742.2 top 10343 seqs: 3.372e-18 (Corrected p-value: 1.794e-15) 132. Fisher-exact p-value of motif UP00085_1 Sfpi1_primary top 10343 seqs: 4.448e-18 (Corrected p-value: 2.366e-15) 133. Fisher-exact p-value of motif UP00106_1 Vax2_3500.1 top 10343 seqs: 9.841e-18 (Corrected p-value: 5.235e-15) 134. Fisher-exact p-value of motif UP00088_2 Plagl1_secondary top 10343 seqs: 2.478e-17 (Corrected p-value: 1.319e-14) 135. Fisher-exact p-value of motif UP00096_1 Sox13_primary top 10343 seqs: 8.416e-17 (Corrected p-value: 4.477e-14) 136. Fisher-exact p-value of motif UP00218_1 Dbx2_3487.1 top 10343 seqs: 1.752e-16 (Corrected p-value: 9.32e-14) 137. Fisher-exact p-value of motif UP00233_1 Meox1_2310.2 top 10343 seqs: 1.757e-16 (Corrected p-value: 9.345e-14) 138. Fisher-exact p-value of motif UP00158_1 Pou1f1_3818.1 top 10343 seqs: 2.062e-16 (Corrected p-value: 1.097e-13) 139. Fisher-exact p-value of motif MA0050.1 IRF1 top 10343 seqs: 2.364e-16 (Corrected p-value: 1.257e-13) 140. Fisher-exact p-value of motif UP00048_1 Rara_primary top 10343 seqs: 4.897e-16 (Corrected p-value: 2.605e-13) 141. Fisher-exact p-value of motif MA0135.1 Lhx3 top 10343 seqs: 6.345e-16 (Corrected p-value: 3.376e-13) 142. Fisher-exact p-value of motif UP00008_1 Six6_primary top 10343 seqs: 1.161e-15 (Corrected p-value: 6.176e-13) 143. Fisher-exact p-value of motif UP00044_2 Mafk_secondary top 10343 seqs: 1.613e-15 (Corrected p-value: 8.579e-13) 144. Fisher-exact p-value of motif UP00129_1 Pou3f1_3819.1 top 10343 seqs: 1.925e-15 (Corrected p-value: 1.024e-12) 145. Fisher-exact p-value of motif UP00209_2 Cart1_1275.1 top 10343 seqs: 2.474e-15 (Corrected p-value: 1.316e-12) 146. Fisher-exact p-value of motif UP00237_1 Otp_3496.1 top 10343 seqs: 2.892e-15 (Corrected p-value: 1.538e-12) 147. Fisher-exact p-value of motif UP00046_1 Tcfe2a_primary top 10343 seqs: 3.292e-15 (Corrected p-value: 1.751e-12) 148. Fisher-exact p-value of motif MA0040.1 Foxq1 top 10343 seqs: 3.414e-15 (Corrected p-value: 1.816e-12) 149. Fisher-exact p-value of motif UP00088_1 Plagl1_primary top 10343 seqs: 4.279e-15 (Corrected p-value: 2.276e-12) 150. Fisher-exact p-value of motif UP00217_1 Hoxa10_2318.1 top 10343 seqs: 4.654e-15 (Corrected p-value: 2.476e-12) 151. Fisher-exact p-value of motif MA0033.1 FOXL1 top 10343 seqs: 4.865e-15 (Corrected p-value: 2.588e-12) 152. Fisher-exact p-value of motif UP00141_1 Vsx1_1728.1 top 10343 seqs: 6.229e-15 (Corrected p-value: 3.314e-12) 153. Fisher-exact p-value of motif UP00094_2 Zfp128_secondary top 10343 seqs: 6.439e-15 (Corrected p-value: 3.425e-12) 154. Fisher-exact p-value of motif UP00162_1 Evx1_3952.2 top 10343 seqs: 7.543e-15 (Corrected p-value: 4.013e-12) 155. Fisher-exact p-value of motif UP00259_1 Hoxb6_3428.2 top 10343 seqs: 1.005e-14 (Corrected p-value: 5.347e-12) 156. Fisher-exact p-value of motif MA0088.1 znf143 top 10343 seqs: 1.951e-14 (Corrected p-value: 1.038e-11) 157. Fisher-exact p-value of motif UP00002_2 Sp4_secondary top 10343 seqs: 4.753e-14 (Corrected p-value: 2.528e-11) 158. Fisher-exact p-value of motif UP00007_2 Egr1_secondary top 10343 seqs: 6.773e-14 (Corrected p-value: 3.603e-11) 159. Fisher-exact p-value of motif MA0002.2 RUNX1 top 10343 seqs: 6.774e-14 (Corrected p-value: 3.604e-11) 160. Fisher-exact p-value of motif UP00200_2 Nkx6-1_2825.2 top 10343 seqs: 6.891e-14 (Corrected p-value: 3.666e-11) 161. Fisher-exact p-value of motif UP00197_1 Hoxc9_2367.2 top 10343 seqs: 1.046e-13 (Corrected p-value: 5.563e-11) 162. Fisher-exact p-value of motif UP00023_2 Sox30_secondary top 10343 seqs: 1.093e-13 (Corrected p-value: 5.812e-11) 163. Fisher-exact p-value of motif MA0259.1 HIF1A::ARNT top 10343 seqs: 1.411e-13 (Corrected p-value: 7.509e-11) 164. Fisher-exact p-value of motif UP00024_1 Glis2_primary top 10343 seqs: 2.325e-13 (Corrected p-value: 1.237e-10) 165. Fisher-exact p-value of motif UP00187_1 Alx4_1744.1 top 10343 seqs: 2.82e-13 (Corrected p-value: 1.5e-10) 166. Fisher-exact p-value of motif UP00165_1 Titf1_1722.2 top 10343 seqs: 3.362e-13 (Corrected p-value: 1.788e-10) 167. Fisher-exact p-value of motif UP00172_1 Prop1_3949.1 top 10343 seqs: 4.036e-13 (Corrected p-value: 2.147e-10) 168. Fisher-exact p-value of motif MA0105.1 NFKB1 top 10343 seqs: 4.145e-13 (Corrected p-value: 2.205e-10) 169. Fisher-exact p-value of motif MA0125.1 Nobox top 10343 seqs: 6.454e-13 (Corrected p-value: 3.433e-10) 170. Fisher-exact p-value of motif MA0058.1 MAX top 10343 seqs: 7.224e-13 (Corrected p-value: 3.843e-10) 171. Fisher-exact p-value of motif MA0060.1 NFYA top 10343 seqs: 7.418e-13 (Corrected p-value: 3.946e-10) 172. Fisher-exact p-value of motif UP00055_2 Hbp1_secondary top 10343 seqs: 7.495e-13 (Corrected p-value: 3.987e-10) 173. Fisher-exact p-value of motif UP00149_1 Phox2b_3948.1 top 10343 seqs: 8.3e-13 (Corrected p-value: 4.415e-10) 174. Fisher-exact p-value of motif UP00066_2 Hnf4a_secondary top 10343 seqs: 8.606e-13 (Corrected p-value: 4.579e-10) 175. Fisher-exact p-value of motif UP00035_2 Hic1_secondary top 10343 seqs: 1.274e-12 (Corrected p-value: 6.78e-10) 176. Fisher-exact p-value of motif UP00209_1 Cart1_0997.1 top 10343 seqs: 1.302e-12 (Corrected p-value: 6.925e-10) 177. Fisher-exact p-value of motif MA0076.1 ELK4 top 10343 seqs: 1.532e-12 (Corrected p-value: 8.152e-10) 178. Fisher-exact p-value of motif UP00406_1 Spdef_primary top 10343 seqs: 1.575e-12 (Corrected p-value: 8.38e-10) 179. Fisher-exact p-value of motif UP00132_1 Evx2_2645.3 top 10343 seqs: 1.768e-12 (Corrected p-value: 9.406e-10) 180. Fisher-exact p-value of motif MA0137.2 STAT1 top 10343 seqs: 2.466e-12 (Corrected p-value: 1.312e-09) 181. Fisher-exact p-value of motif UP00266_1 Prrx1_3442.1 top 10343 seqs: 2.929e-12 (Corrected p-value: 1.558e-09) 182. Fisher-exact p-value of motif MA0081.1 SPIB top 10343 seqs: 3.188e-12 (Corrected p-value: 1.696e-09) 183. Fisher-exact p-value of motif UP00118_1 Pou4f3_2791.1 top 10343 seqs: 3.889e-12 (Corrected p-value: 2.069e-09) 184. Fisher-exact p-value of motif UP00195_1 Six3_1732.2 top 10343 seqs: 4.055e-12 (Corrected p-value: 2.157e-09) 185. Fisher-exact p-value of motif UP00054_1 Tcf7_primary top 10343 seqs: 4.808e-12 (Corrected p-value: 2.558e-09) 186. Fisher-exact p-value of motif UP00263_1 Hoxb8_3780.2 top 10343 seqs: 4.947e-12 (Corrected p-value: 2.632e-09) 187. Fisher-exact p-value of motif UP00108_1 Alx3_3418.2 top 10343 seqs: 6.366e-12 (Corrected p-value: 3.387e-09) 188. Fisher-exact p-value of motif UP00166_1 Barhl1_2590.2 top 10343 seqs: 6.549e-12 (Corrected p-value: 3.484e-09) 189. Fisher-exact p-value of motif UP00234_1 Msx1_3031.2 top 10343 seqs: 7.528e-12 (Corrected p-value: 4.005e-09) 190. Fisher-exact p-value of motif MA0138.1 REST top 10343 seqs: 8.635e-12 (Corrected p-value: 4.594e-09) 191. Fisher-exact p-value of motif UP00145_1 Barhl2_3868.1 top 10343 seqs: 9.114e-12 (Corrected p-value: 4.848e-09) 192. Fisher-exact p-value of motif UP00008_4 Six6_2267.5 top 10343 seqs: 1.055e-11 (Corrected p-value: 5.611e-09) 193. Fisher-exact p-value of motif UP00206_1 Hoxb7_3953.1 top 10343 seqs: 1.166e-11 (Corrected p-value: 6.205e-09) 194. Fisher-exact p-value of motif UP00159_1 Six2_2307.2 top 10343 seqs: 1.258e-11 (Corrected p-value: 6.692e-09) 195. Fisher-exact p-value of motif UP00407_2 Elf3_secondary top 10343 seqs: 1.263e-11 (Corrected p-value: 6.72e-09) 196. Fisher-exact p-value of motif UP00024_2 Glis2_secondary top 10343 seqs: 1.773e-11 (Corrected p-value: 9.433e-09) 197. Fisher-exact p-value of motif UP00171_1 Msx3_3206.1 top 10343 seqs: 1.95e-11 (Corrected p-value: 1.038e-08) 198. Fisher-exact p-value of motif UP00032_1 Gata3_primary top 10343 seqs: 2.201e-11 (Corrected p-value: 1.171e-08) 199. Fisher-exact p-value of motif MA0080.1 SPI1 top 10343 seqs: 2.401e-11 (Corrected p-value: 1.277e-08) 200. Fisher-exact p-value of motif MA0098.1 ETS1 top 10343 seqs: 2.401e-11 (Corrected p-value: 1.277e-08) 201. Fisher-exact p-value of motif UP00009_1 Nr2f2_primary top 10343 seqs: 2.668e-11 (Corrected p-value: 1.419e-08) 202. Fisher-exact p-value of motif UP00146_1 Pou6f1_1731.2 top 10343 seqs: 3.983e-11 (Corrected p-value: 2.119e-08) 203. Fisher-exact p-value of motif UP00069_2 Sox1_secondary top 10343 seqs: 5.087e-11 (Corrected p-value: 2.706e-08) 204. Fisher-exact p-value of motif UP00083_1 Tcf7l2_primary top 10343 seqs: 6.175e-11 (Corrected p-value: 3.285e-08) 205. Fisher-exact p-value of motif UP00121_1 Hoxd10_2368.2 top 10343 seqs: 9.223e-11 (Corrected p-value: 4.906e-08) 206. Fisher-exact p-value of motif UP00074_1 Isgf3g_primary top 10343 seqs: 9.945e-11 (Corrected p-value: 5.291e-08) 207. Fisher-exact p-value of motif MA0104.2 Mycn top 10343 seqs: 1.242e-10 (Corrected p-value: 6.608e-08) 208. Fisher-exact p-value of motif UP00136_1 Prrx2_3072.1 top 10343 seqs: 1.507e-10 (Corrected p-value: 8.018e-08) 209. Fisher-exact p-value of motif UP00192_1 Six1_0935.2 top 10343 seqs: 1.513e-10 (Corrected p-value: 8.047e-08) 210. Fisher-exact p-value of motif UP00104_1 Hmx1_3423.1 top 10343 seqs: 1.86e-10 (Corrected p-value: 9.898e-08) 211. Fisher-exact p-value of motif UP00071_2 Sox21_secondary top 10343 seqs: 2.075e-10 (Corrected p-value: 1.104e-07) 212. Fisher-exact p-value of motif MA0095.1 YY1 top 10343 seqs: 2.132e-10 (Corrected p-value: 1.134e-07) 213. Fisher-exact p-value of motif MA0051.1 IRF2 top 10343 seqs: 2.396e-10 (Corrected p-value: 1.275e-07) 214. Fisher-exact p-value of motif MA0047.1 Foxa2 top 10343 seqs: 3.023e-10 (Corrected p-value: 1.608e-07) 215. Fisher-exact p-value of motif UP00045_2 Mafb_secondary top 10343 seqs: 3.787e-10 (Corrected p-value: 2.015e-07) 216. Fisher-exact p-value of motif MA0052.1 MEF2A top 10343 seqs: 3.854e-10 (Corrected p-value: 2.05e-07) 217. Fisher-exact p-value of motif MA0028.1 ELK1 top 10343 seqs: 4.779e-10 (Corrected p-value: 2.542e-07) 218. Fisher-exact p-value of motif MA0109.1 Hltf top 10343 seqs: 6.165e-10 (Corrected p-value: 3.28e-07) 219. Fisher-exact p-value of motif UP00028_2 Tcfap2e_secondary top 10343 seqs: 6.619e-10 (Corrected p-value: 3.521e-07) 220. Fisher-exact p-value of motif UP00155_1 Hmx2_3424.3 top 10343 seqs: 7.485e-10 (Corrected p-value: 3.982e-07) 221. Fisher-exact p-value of motif MA0116.1 Zfp423 top 10343 seqs: 1.037e-09 (Corrected p-value: 5.518e-07) 222. Fisher-exact p-value of motif UP00167_1 En1_3123.2 top 10343 seqs: 1.095e-09 (Corrected p-value: 5.825e-07) 223. Fisher-exact p-value of motif UP00164_2 Hoxa7_3750.1 top 10343 seqs: 1.468e-09 (Corrected p-value: 7.81e-07) 224. Fisher-exact p-value of motif UP00247_1 Pax4_3989.2 top 10343 seqs: 1.987e-09 (Corrected p-value: 1.057e-06) 225. Fisher-exact p-value of motif UP00039_2 Foxj3_secondary top 10343 seqs: 2.309e-09 (Corrected p-value: 1.228e-06) 226. Fisher-exact p-value of motif UP00157_1 Hmx3_3490.2 top 10343 seqs: 2.811e-09 (Corrected p-value: 1.496e-06) 227. Fisher-exact p-value of motif UP00077_1 Srf_primary top 10343 seqs: 3.746e-09 (Corrected p-value: 1.993e-06) 228. Fisher-exact p-value of motif UP00078_1 Arid3a_primary top 10343 seqs: 3.767e-09 (Corrected p-value: 2.004e-06) 229. Fisher-exact p-value of motif UP00081_2 Mybl1_secondary top 10343 seqs: 4.663e-09 (Corrected p-value: 2.481e-06) 230. Fisher-exact p-value of motif UP00201_1 Emx2_3420.1 top 10343 seqs: 7.313e-09 (Corrected p-value: 3.891e-06) 231. Fisher-exact p-value of motif UP00008_3 Six6_2267.4 top 10343 seqs: 7.764e-09 (Corrected p-value: 4.13e-06) 232. Fisher-exact p-value of motif UP00067_1 Lef1_primary top 10343 seqs: 8.419e-09 (Corrected p-value: 4.479e-06) 233. Fisher-exact p-value of motif MA0072.1 RORA_2 top 10343 seqs: 8.663e-09 (Corrected p-value: 4.609e-06) 234. Fisher-exact p-value of motif UP00062_2 Sox4_secondary top 10343 seqs: 8.895e-09 (Corrected p-value: 4.732e-06) 235. Fisher-exact p-value of motif UP00146_2 Pou6f1_3733.1 top 10343 seqs: 1.073e-08 (Corrected p-value: 5.707e-06) 236. Fisher-exact p-value of motif UP00058_1 Tcf3_primary top 10343 seqs: 1.111e-08 (Corrected p-value: 5.909e-06) 237. Fisher-exact p-value of motif UP00257_1 Shox2_2641.2 top 10343 seqs: 1.174e-08 (Corrected p-value: 6.244e-06) 238. Fisher-exact p-value of motif UP00047_2 Zbtb7b_secondary top 10343 seqs: 2.037e-08 (Corrected p-value: 1.084e-05) 239. Fisher-exact p-value of motif MA0069.1 Pax6 top 10343 seqs: 2.148e-08 (Corrected p-value: 1.143e-05) 240. Fisher-exact p-value of motif UP00142_1 Uncx4.1_2281.2 top 10343 seqs: 2.39e-08 (Corrected p-value: 1.271e-05) 241. Fisher-exact p-value of motif MA0147.1 Myc top 10343 seqs: 2.416e-08 (Corrected p-value: 1.285e-05) 242. Fisher-exact p-value of motif UP00249_1 Nkx2-5_3436.1 top 10343 seqs: 2.607e-08 (Corrected p-value: 1.387e-05) 243. Fisher-exact p-value of motif MA0027.1 En1 top 10343 seqs: 3.011e-08 (Corrected p-value: 1.602e-05) 244. Fisher-exact p-value of motif MA0035.2 Gata1 top 10343 seqs: 5.298e-08 (Corrected p-value: 2.819e-05) 245. Fisher-exact p-value of motif UP00094_1 Zfp128_primary top 10343 seqs: 5.849e-08 (Corrected p-value: 3.112e-05) 246. Fisher-exact p-value of motif UP00137_1 Hoxb3_1720.2 top 10343 seqs: 8.921e-08 (Corrected p-value: 4.746e-05) 247. Fisher-exact p-value of motif UP00036_1 Myf6_primary top 10343 seqs: 9.019e-08 (Corrected p-value: 4.798e-05) 248. Fisher-exact p-value of motif MA0152.1 NFATC2 top 10343 seqs: 9.359e-08 (Corrected p-value: 4.979e-05) 249. Fisher-exact p-value of motif UP00224_1 Pax6_3838.3 top 10343 seqs: 1.129e-07 (Corrected p-value: 6.008e-05) 250. Fisher-exact p-value of motif UP00170_1 Isl2_3430.1 top 10343 seqs: 1.247e-07 (Corrected p-value: 6.632e-05) 251. Fisher-exact p-value of motif UP00227_1 Duxl_1286.2 top 10343 seqs: 1.256e-07 (Corrected p-value: 6.682e-05) 252. Fisher-exact p-value of motif MA0014.1 Pax5 top 10343 seqs: 1.319e-07 (Corrected p-value: 7.019e-05) 253. Fisher-exact p-value of motif MA0163.1 PLAG1 top 10343 seqs: 1.902e-07 (Corrected p-value: 0.0001012) 254. Fisher-exact p-value of motif MA0065.2 PPARG::RXRA top 10343 seqs: 2.203e-07 (Corrected p-value: 0.0001172) 255. Fisher-exact p-value of motif UP00107_1 Nkx2-4_3074.1 top 10343 seqs: 2.462e-07 (Corrected p-value: 0.0001309) 256. Fisher-exact p-value of motif MA0074.1 RXRA::VDR top 10343 seqs: 2.5e-07 (Corrected p-value: 0.000133) 257. Fisher-exact p-value of motif UP00123_1 Hlxb9_3422.1 top 10343 seqs: 3.589e-07 (Corrected p-value: 0.0001909) 258. Fisher-exact p-value of motif UP00116_1 Rhox6_4251.1 top 10343 seqs: 3.906e-07 (Corrected p-value: 0.0002078) 259. Fisher-exact p-value of motif UP00060_1 Max_primary top 10343 seqs: 4.311e-07 (Corrected p-value: 0.0002293) 260. Fisher-exact p-value of motif MA0124.1 NKX3-1 top 10343 seqs: 5.028e-07 (Corrected p-value: 0.0002675) 261. Fisher-exact p-value of motif MA0046.1 HNF1A top 10343 seqs: 5.11e-07 (Corrected p-value: 0.0002718) 262. Fisher-exact p-value of motif MA0035.1 Gata1 top 10343 seqs: 6.128e-07 (Corrected p-value: 0.000326) 263. Fisher-exact p-value of motif MA0100.1 Myb top 10343 seqs: 6.728e-07 (Corrected p-value: 0.0003579) 264. Fisher-exact p-value of motif UP00054_2 Tcf7_secondary top 10343 seqs: 8.842e-07 (Corrected p-value: 0.0004703) 265. Fisher-exact p-value of motif UP00025_2 Foxk1_secondary top 10343 seqs: 9.157e-07 (Corrected p-value: 0.000487) 266. Fisher-exact p-value of motif MA0070.1 PBX1 top 10343 seqs: 1.316e-06 (Corrected p-value: 0.0007) 267. Fisher-exact p-value of motif UP00126_1 Dlx2_2273.2 top 10343 seqs: 1.398e-06 (Corrected p-value: 0.0007436) 268. Fisher-exact p-value of motif UP00251_1 Esx1_3124.2 top 10343 seqs: 1.604e-06 (Corrected p-value: 0.0008531)