# motif E-value adj_p-value log_adj_p-value bin_width total_width sites_in_bin total_sites p_success p-value mult_tests # Found 155 motifs with E-values <= 10 MA0143.1 Sox2 3.5e-433 6.6e-436 -1002 80 470 1766 3541 0.17021 2.8e-438 235 Sox11_primary 1.4e-373 2.5e-376 -864.8 86 466 1752 3551 0.18455 1.1e-378 233 Sox4_primary 1.9e-366 3.5e-369 -848.4 82 466 1685 3513 0.17597 1.5e-371 233 MA0077.1 SOX9 1.4e-359 2.7e-362 -832.5 76 482 1648 3747 0.15768 1.1e-364 241 Sox30_primary 2.1e-309 4.0e-312 -717 68 468 1452 3578 0.1453 1.7e-314 234 Sry_secondary 3.3e-306 6.2e-309 -709.7 66 466 1477 3776 0.14163 2.7e-311 233 MA0142.1 Pou5f1 2.8e-260 5.2e-263 -603.9 84 470 1348 2942 0.17872 2.2e-265 235 Sox7_primary 1.4e-241 2.6e-244 -560.9 64 456 1245 3318 0.14035 1.2e-246 228 MA0078.1 Sox17 2.0e-233 3.7e-236 -542.1 76 482 1368 3521 0.15768 1.5e-238 241 Sox12_primary 3.3e-233 6.2e-236 -541.6 74 472 1375 3567 0.15678 2.6e-238 236 Sox15_primary 1.5e-218 2.9e-221 -507.8 68 466 1282 3528 0.14592 1.2e-223 233 Sox21_secondary 2.1e-218 3.9e-221 -507.5 64 466 1263 3640 0.13734 1.7e-223 233 MA0442.1 SOX10 2.9e-215 5.5e-218 -500.3 114 488 1844 3978 0.23361 2.2e-220 244 Sox14_secondary 1.7e-214 3.2e-217 -498.5 112 470 1767 3699 0.2383 1.4e-219 235 Sox18_primary 2.8e-208 5.3e-211 -484.2 74 468 1327 3545 0.15812 2.2e-213 234 Sox5_primary 9.1e-163 1.7e-165 -379.4 62 468 1034 3214 0.13248 7.3e-168 234 Sox8_primary 7.7e-159 1.4e-161 -370.3 66 466 1116 3425 0.14163 6.2e-164 233 MA0084.1 SRY 1.7e-154 3.2e-157 -360.3 72 482 1234 3818 0.14938 1.3e-159 241 MA0087.1 Sox5 1.3e-150 2.4e-153 -351.4 56 486 903 3086 0.11523 1.0e-155 243 Hbp1_secondary 2.4e-121 4.5e-124 -284 70 466 1100 3555 0.15021 1.9e-126 233 Pou2f3_3986.2 7.7e-114 1.4e-116 -266.7 72 468 754 2086 0.15385 6.2e-119 234 Pou2f2_3748.1 1.7e-101 3.2e-104 -238.3 80 468 814 2227 0.17094 1.3e-106 234 Sox1_secondary 2.1e-098 3.9e-101 -231.2 72 470 1043 3503 0.15319 1.7e-103 235 Sox13_primary 4.2e-084 8.0e-087 -198.3 46 468 686 3116 0.098291 3.4e-089 234 Sox17_primary 2.5e-074 4.7e-077 -175.8 38 470 597 3228 0.080851 2.0e-079 235 Lef1_primary 7.1e-069 1.3e-071 -163.2 102 466 957 2527 0.21888 5.7e-074 233 Tcf7l2_primary 3.8e-068 7.1e-071 -161.5 86 466 930 2852 0.18455 3.0e-073 233 Pou3f3_3235.2 3.0e-062 5.6e-065 -147.9 76 466 646 2023 0.16309 2.4e-067 233 Foxa2_secondary 1.1e-058 2.1e-061 -139.7 62 470 880 3780 0.13191 8.9e-064 235 Foxj3_secondary 3.7e-058 7.0e-061 -138.5 42 466 632 3488 0.090129 3.0e-063 233 Tcf3_primary 2.1e-053 4.0e-056 -127.6 102 466 1116 3262 0.21888 1.7e-058 233 Tcf7_primary 4.0e-047 7.5e-050 -113.1 82 466 943 3336 0.17597 3.2e-052 233 Sox12_secondary 1.4e-043 2.6e-046 -105 86 468 1062 3775 0.18376 1.1e-048 234 Foxj1_secondary 1.8e-031 3.4e-034 -77.05 76 470 872 3577 0.1617 1.5e-036 235 Foxl1_secondary 1.5e-024 2.9e-027 -61.12 64 468 717 3469 0.13675 1.2e-029 234 Bsx_3483.2 3.9e-019 7.3e-022 -48.68 60 468 482 2385 0.12821 3.1e-024 234 Hbp1_primary 6.3e-017 1.2e-019 -43.58 146 468 921 2259 0.31197 5.1e-022 234 Barx1_2877.1 7.0e-017 1.3e-019 -43.48 102 468 696 2288 0.21795 5.6e-022 234 Foxk1_secondary 3.7e-016 7.0e-019 -41.81 76 470 721 3193 0.1617 3.0e-021 235 Nkx1-1_3856.3 5.0e-013 9.3e-016 -34.61 126 466 713 1987 0.27039 4.0e-018 233 Dlx5_3419.2 3.4e-011 6.4e-014 -30.38 102 468 559 1873 0.21795 2.7e-016 234 MA0039.2 Klf4 1.8e-010 3.4e-013 -28.7 246 480 1637 2787 0.5125 1.4e-015 240 Sry_primary 4.4e-010 8.3e-013 -27.82 44 468 232 1460 0.094017 3.5e-015 234 Zic3_secondary 5.6e-010 1.1e-012 -27.58 132 470 1049 3037 0.28085 4.5e-015 235 Zic1_secondary 6.5e-010 1.2e-012 -27.43 130 470 1012 2962 0.2766 5.2e-015 235 Dlx2_2273.2 3.0e-009 5.6e-012 -25.91 30 468 224 2061 0.064103 2.4e-014 234 Zic2_secondary 3.2e-009 6.1e-012 -25.82 246 470 1768 2987 0.5234 2.6e-014 235 Tcfap2c_secondary 9.9e-009 1.9e-011 -24.71 140 472 1171 3284 0.29661 7.9e-014 236 Sp4_secondary 1.4e-007 2.7e-010 -22.04 346 470 2226 2806 0.73617 1.1e-012 235 Hoxd3_1742.2 3.2e-007 6.0e-010 -21.24 96 468 630 2386 0.20513 2.6e-012 234 Klf7_primary 2.7e-006 5.1e-009 -19.1 256 468 1568 2564 0.54701 2.2e-011 234 Vax1_3499.1 2.9e-006 5.5e-009 -19.03 140 468 832 2289 0.29915 2.3e-011 234 Sox21_primary 8.0e-006 1.5e-008 -18.02 42 468 322 2496 0.089744 6.4e-011 234 MA0043.1 HLF 1.2e-005 2.2e-008 -17.62 44 476 287 2121 0.092437 9.3e-011 238 E2F3_primary 1.6e-005 2.9e-008 -17.34 112 470 258 755 0.2383 1.3e-010 235 Lhx6_3432.1 8.0e-005 1.5e-007 -15.71 172 466 658 1474 0.3691 6.5e-010 233 MA0067.1 Pax2 9.1e-005 1.7e-007 -15.59 36 484 376 3689 0.07438 7.0e-010 242 Sox14_primary 1.0e-004 1.9e-007 -15.46 34 468 244 2266 0.07265 8.2e-010 234 Sox7_secondary 1.8e-004 3.3e-007 -14.91 112 456 979 3371 0.24561 1.5e-009 228 Nkx1-2_3214.1 1.9e-004 3.5e-007 -14.85 128 466 731 2199 0.27468 1.5e-009 233 Smad3_secondary 2.6e-004 5.0e-007 -14.52 346 466 2224 2815 0.74249 2.1e-009 233 Tcf7l2_secondary 5.3e-004 9.9e-007 -13.82 34 468 282 2739 0.07265 4.2e-009 234 MA0079.2 SP1 6.9e-004 1.3e-006 -13.56 300 480 2244 3336 0.625 5.4e-009 240 Esrra_primary 1.0e-003 1.9e-006 -13.17 238 466 1260 2207 0.51073 8.2e-009 233 Zic2_primary 1.2e-003 2.3e-006 -12.97 236 470 1238 2202 0.50213 9.9e-009 235 Hoxb5_3122.2 1.8e-003 3.4e-006 -12.58 140 468 724 2028 0.29915 1.5e-008 234 MA0160.1 NR4A2 1.9e-003 3.6e-006 -12.53 138 484 1155 3522 0.28512 1.5e-008 242 Hoxa3_2783.2 3.0e-003 5.7e-006 -12.08 102 472 465 1708 0.2161 2.4e-008 236 MA0141.1 Esrrb 3.1e-003 5.9e-006 -12.04 200 476 1277 2703 0.42017 2.5e-008 238 MA0065.2 PPARG::RXRA 3.5e-003 6.6e-006 -11.93 288 470 2284 3474 0.61277 2.8e-008 235 MA0114.1 HNF4A 4.2e-003 7.8e-006 -11.76 242 474 1977 3556 0.51055 3.3e-008 237 Meox1_2310.2 4.7e-003 8.8e-006 -11.64 136 468 720 2087 0.2906 3.8e-008 234 Hoxd1_3448.1 4.7e-003 8.9e-006 -11.63 172 466 811 1888 0.3691 3.8e-008 233 Hoxa3_primary 4.8e-003 9.0e-006 -11.62 78 472 372 1728 0.16525 3.8e-008 236 E2F2_primary 4.9e-003 9.2e-006 -11.6 112 470 287 906 0.2383 3.9e-008 235 Ipf1_3815.1 5.9e-003 1.1e-005 -11.41 140 468 751 2126 0.29915 4.8e-008 234 Sp4_primary 6.1e-003 1.1e-005 -11.38 274 466 1382 2144 0.58798 4.9e-008 233 Zic1_primary 6.3e-003 1.2e-005 -11.35 260 472 1312 2158 0.55085 5.0e-008 236 Hoxb6_3428.2 1.1e-002 2.1e-005 -10.77 42 468 302 2496 0.089744 9.0e-008 234 Zic3_primary 1.3e-002 2.4e-005 -10.65 282 470 1482 2269 0.6 1.0e-007 235 Mafb_secondary 1.3e-002 2.4e-005 -10.63 48 470 452 3476 0.10213 1.0e-007 235 Lhx8_2247.2 1.4e-002 2.5e-005 -10.58 118 466 410 1288 0.25322 1.1e-007 233 Hoxa5_3415.1 1.4e-002 2.6e-005 -10.54 146 468 790 2166 0.31197 1.1e-007 234 MA0090.1 TEAD1 1.4e-002 2.7e-005 -10.54 324 476 972 1302 0.68067 1.1e-007 238 Sox11_secondary 1.7e-002 3.2e-005 -10.34 24 472 227 3139 0.050847 1.4e-007 236 Zfp281_primary 2.0e-002 3.7e-005 -10.21 342 470 1960 2538 0.72766 1.6e-007 235 Lhx4_1719.2 2.8e-002 5.2e-005 -9.86 150 466 679 1794 0.32189 2.2e-007 233 Hoxb4_2627.1 2.9e-002 5.4e-005 -9.826 146 466 642 1731 0.3133 2.3e-007 233 MA0125.1 Nobox 3.4e-002 6.3e-005 -9.671 44 484 350 2948 0.090909 2.6e-007 242 Plagl1_primary 3.6e-002 6.8e-005 -9.59 232 468 964 1733 0.49573 2.9e-007 234 MA0062.2 GABPA 3.7e-002 7.0e-005 -9.573 282 478 1142 1762 0.58996 2.9e-007 239 Sox1_primary 3.8e-002 7.1e-005 -9.559 84 468 680 3170 0.17949 3.0e-007 234 Gabpa_primary 4.1e-002 7.6e-005 -9.483 170 466 632 1475 0.36481 3.3e-007 233 Atf1_secondary 4.5e-002 8.4e-005 -9.383 90 472 690 3041 0.19068 3.6e-007 236 Irf3_secondary 6.4e-002 1.2e-004 -9.032 134 472 1192 3717 0.2839 5.1e-007 236 Myf6_primary 6.4e-002 1.2e-004 -9.023 374 468 2575 3089 0.79915 5.2e-007 234 Zfp740_primary 8.3e-002 1.6e-004 -8.764 348 468 2093 2669 0.74359 6.7e-007 234 Bcl6b_secondary 1.3e-001 2.5e-004 -8.301 344 468 2659 3451 0.73504 1.1e-006 234 Evx2_2645.3 1.3e-001 2.5e-004 -8.296 142 466 330 865 0.30472 1.1e-006 233 Arid5a_secondary 1.5e-001 2.9e-004 -8.155 88 466 719 3238 0.18884 1.2e-006 233 Gbx2_3110.1 1.6e-001 2.9e-004 -8.132 146 466 465 1234 0.3133 1.3e-006 233 MA0150.1 NFE2L2 1.8e-001 3.4e-004 -7.993 144 478 527 1470 0.30126 1.4e-006 239 MA0055.1 Myf 2.4e-001 4.6e-004 -7.687 306 476 1141 1637 0.64286 1.9e-006 238 MA0102.2 CEBPA 2.4e-001 4.6e-004 -7.684 120 482 995 3511 0.24896 1.9e-006 241 Zfp187_secondary 2.6e-001 4.9e-004 -7.627 284 468 2060 3186 0.60684 2.1e-006 234 Crx_3485.1 2.9e-001 5.5e-004 -7.506 146 468 406 1072 0.31197 2.3e-006 234 Gbx1_2883.2 3.1e-001 5.9e-004 -7.443 92 466 384 1568 0.19742 2.5e-006 233 Isx_3445.1 3.3e-001 6.2e-004 -7.38 226 468 692 1264 0.48291 2.7e-006 234 MA0062.1 GABPA 3.4e-001 6.4e-004 -7.355 238 480 1054 1924 0.49583 2.7e-006 240 Duxl_1286.2 3.5e-001 6.5e-004 -7.331 174 466 554 1272 0.37339 2.8e-006 233 Hoxb3_1720.2 3.7e-001 6.9e-004 -7.272 140 466 769 2227 0.30043 3.0e-006 233 Hmx1_3423.1 4.1e-001 7.6e-004 -7.179 44 466 221 1731 0.094421 3.3e-006 233 Sox17_secondary 4.4e-001 8.2e-004 -7.107 90 466 805 3602 0.19313 3.5e-006 233 Sox30_secondary 4.6e-001 8.6e-004 -7.062 42 468 286 2443 0.089744 3.7e-006 234 Zfp105_primary 5.8e-001 1.1e-003 -6.829 46 470 417 3445 0.097872 4.6e-006 235 MA0003.1 TFAP2A 6.1e-001 1.1e-003 -6.779 270 482 2129 3566 0.56017 4.7e-006 241 Tcfap2c_primary 6.4e-001 1.2e-003 -6.729 428 470 2192 2342 0.91064 5.1e-006 235 Gsh2_3990.2 6.4e-001 1.2e-003 -6.724 140 468 679 1966 0.29915 5.1e-006 234 MA0063.1 Nkx2-5 7.2e-001 1.4e-003 -6.6 48 486 426 3497 0.098765 5.6e-006 243 Max_secondary 7.8e-001 1.5e-003 -6.523 28 472 207 2558 0.059322 6.2e-006 236 Evx1_3952.2 8.2e-001 1.5e-003 -6.48 148 466 569 1536 0.3176 6.6e-006 233 MA0070.1 PBX1 8.7e-001 1.6e-003 -6.416 24 476 112 1452 0.05042 6.9e-006 238 Zfp691_primary 8.9e-001 1.7e-003 -6.388 356 466 1290 1594 0.76395 7.2e-006 233 Zbtb7b_secondary 9.3e-001 1.8e-003 -6.344 184 466 982 2232 0.39485 7.5e-006 233 MA0132.1 Pdx1 9.8e-001 1.8e-003 -6.301 82 488 608 3071 0.16803 7.5e-006 244 Hoxa2_3079.1 1.0e+000 2.0e-003 -6.237 178 468 791 1841 0.38034 8.4e-006 234 Ascl2_primary 1.1e+000 2.0e-003 -6.223 394 466 2572 2944 0.84549 8.5e-006 233 Rfx4_primary 1.2e+000 2.3e-003 -6.094 208 470 602 1194 0.44255 9.6e-006 235 Dlx4_3488.2 1.3e+000 2.5e-003 -5.985 20 466 109 1661 0.042918 1.1e-005 233 Dobox5_3493.1 1.4e+000 2.7e-003 -5.906 226 466 776 1433 0.48498 1.2e-005 233 Emx2_3420.1 1.6e+000 2.9e-003 -5.83 146 466 502 1368 0.3133 1.3e-005 233 Og2x_3719.1 1.8e+000 3.4e-003 -5.688 60 466 328 2041 0.12876 1.5e-005 233 Sox15_secondary 1.9e+000 3.6e-003 -5.636 180 470 1441 3450 0.38298 1.5e-005 235 Nkx2-3_3435.1 2.1e+000 4.0e-003 -5.521 382 468 1527 1789 0.81624 1.7e-005 234 Prrx2_3072.1 2.4e+000 4.4e-003 -5.422 68 466 207 1076 0.14592 1.9e-005 233 Tcfap2b_secondary 2.7e+000 5.0e-003 -5.292 338 470 2080 2759 0.71915 2.1e-005 235 Hoxa1_3425.1 2.7e+000 5.1e-003 -5.279 176 468 594 1381 0.37607 2.2e-005 234 IRC900814_primary 2.8e+000 5.3e-003 -5.241 44 468 128 950 0.094017 2.3e-005 234 MA0146.1 Zfx 3.2e+000 6.0e-003 -5.109 406 472 1666 1868 0.86017 2.6e-005 236 Rax_3443.1 4.3e+000 8.0e-003 -4.828 116 466 363 1211 0.24893 3.4e-005 233 Glis2_primary 4.5e+000 8.4e-003 -4.777 260 468 1552 2611 0.55556 3.6e-005 234 Rfxdc2_primary 4.7e+000 8.8e-003 -4.73 276 470 954 1497 0.58723 3.8e-005 235 Foxj1_primary 5.4e+000 1.0e-002 -4.592 20 468 187 3255 0.042735 4.4e-005 234 Lef1_secondary 6.1e+000 1.2e-002 -4.462 34 468 235 2503 0.07265 5.0e-005 234 Tcfap2a_primary 6.1e+000 1.2e-002 -4.461 428 470 2356 2527 0.91064 4.9e-005 235 Tcfap2b_primary 6.8e+000 1.3e-002 -4.367 346 472 1620 2103 0.73305 5.4e-005 236 Tcfap2e_primary 7.0e+000 1.3e-002 -4.332 398 470 1865 2128 0.84681 5.6e-005 235 Klf7_secondary 7.0e+000 1.3e-002 -4.326 334 466 1278 1685 0.71674 5.7e-005 233 Hlxb9_3422.1 7.5e+000 1.4e-002 -4.26 46 468 173 1315 0.098291 6.1e-005 234 Pitx3_3497.2 8.1e+000 1.5e-002 -4.18 348 468 898 1133 0.74359 6.6e-005 234 MA0089.1 NFE2L1::MafG 8.5e+000 1.6e-002 -4.135 50 488 455 3726 0.10246 6.6e-005 244 Lhx2_0953.2 8.9e+000 1.7e-002 -4.095 136 466 588 1761 0.29185 7.2e-005 233 Msx1_3031.2 9.6e+000 1.8e-002 -4.01 38 468 192 1792 0.081197 7.8e-005 234 Foxj3_primary 9.7e+000 1.8e-002 -4.009 94 466 591 2542 0.20172 7.9e-005 233 Hnf4a_primary 1.0e+001 1.9e-002 -3.976 248 466 1385 2428 0.53219 8.1e-005 233